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Chris Ponting

@cgatist.bsky.social

289 Following3.6k Followers

Disease genomics & molecular mechanisms; ME/cfs: http://decodeme.org.uk, SequenceME @ Edinburgh University. Views - my own. He/him.

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@cgatist.bsky.socialOct 11, 2026, 12:31 PM

Three weeks ago UK Biobank indicated "that re-opening access will start before October." This did not happen. We will get back to you when/if we're told more. @decodemestudy.bsky.social #MEcfs #pwME #UKBiobank @ukbiobank.ac.uk

@alemmatthees.bsky.socialOct 8, 2026, 9:51 PMReposted by @cgatist.bsky.social

(2/3) I had to glimpse the cards to organise them. Then one day I did the unthinkable. I took a printout of the Wikipedia article on #MECFS and read a whole sentence. Later a whole paragraph, then another! My eyes hurt and my brain crashed, but after a week I read it all and started on DecodeME.

@jkpritch.bsky.socialOct 9, 2026, 12:41 AMReposted by @cgatist.bsky.social

I want to try something again at #ASHG26: I'll block off some time on Weds/Th/Friday afternoons to meet with trainees who would be interested to chat on any topic.

I have done this the last 2 years and it was great to meet a whole bunch of new people, from many countries, at all career stages!

@georgemonbiot.bsky.socialOct 2, 2026, 7:46 AMReposted by @cgatist.bsky.social

@davetuller1.bsky.social, a great champion of patients, interviewed me about the massive, ongoing scandal of the neglect, abuse and mistreatment of people with ME/CFS www.youtube.com/watch?v=Maae...

@resprofnews.bsky.socialSep 30, 2026, 8:21 AMReposted by @cgatist.bsky.social

MRC success rates drop sharply after grants overhaul.

Warnings of “catastrophic” impact on medical researchers as some rates fall below 5 per cent.

www.researchprofessionalnews.com/rr-news-uk-r...

@cgatist.bsky.socialSep 29, 2026, 10:41 AM

Rob Wust (Amsterdam) shows that #pwME and #pwLC (all with PEM) *perfectly* separate from healthy controls with respect to their muscle microvasculature radius. Lower lumen radius in ME/LC. Needs replication, but this muscle biopsy metric has high diagnostic potential.
#MEcfs #PRIME26 #LongCovid

@cgatist.bsky.socialSep 29, 2026, 8:48 AM

Dr Katharine Cheston on the @actionforme.bsky.social 2025 Big Survey Results. 5,424 people, 85.1% female; 18.4% v/severe. She is "shocked and appalled" by the data: by people's experience living with #MEcfs. Headline results will be released later in 2026.
#pwME #PRIME26

@cgatist.bsky.socialSep 28, 2026, 2:15 PM

Matthias Wielscher (Vienna) showing significant genetic associations to ME/CFS via rare gene disruptive variants in UK Biobank to C2orf66 and OBSCN genes. Wishes to use long read Oxford Nanopore Technologies approach in a replication study.

@uoe-igc.bsky.socialSep 28, 2026, 9:35 AMReposted by @cgatist.bsky.social

Exciting to see the official launch of the Genetic Epidemiology of ME/CFS (GEM) International Consortium at this two-day symposium. At IGC, important research into ME/CFS is being conducted by @cgatist.bsky.social, @aryback.bsky.social
and Joshua Dibble who are all involved in this meeting.

@cgatist.bsky.socialSep 28, 2026, 8:50 AM

Two signals in TMEM106B & VWDE locus. Associations affect gene regulation not protein sequence. Genome wide: the pituitary tissue is the most enriched in gene expression.
Is #MEcfs genetics similar to other diseases? Yes! Long Covid and fibromyalgia have strong genetic correlations w MEcfs.

@cgatist.bsky.socialSep 28, 2026, 8:47 AM

New results. Eleven associations! Focuses on EXD3 Val540Met. (NB: unpublished results that need replication.)
Genetic overlap with neuronal, immune, endocrine and sleep traits.
EXD3 missense variant in exonuclease catalytic cleft. Immune function?
#Prime26

@cgatist.bsky.socialSep 28, 2026, 8:43 AM

Now launches the new consortium. Its point is to identify #MEcfs pathomechanisms, susceptibility and recovery. 60,542 cases and 2.8 million controls. Well powered! Case definition: diverse info, not all optimal.

@cgatist.bsky.socialSep 28, 2026, 8:40 AM

Now up: Hannah Ollila (Helsinki) launching the new international Genetics Epidemiology of ME/CFS (GEM) consortium. Contrasting the genetics & infection trigger of narcolepsy vs #MEcfs. Narcolepsy: HLA-DQB1*06:02 carriers & autoimmunity. Talking about the importance of whole genome sequencing.

@cgatist.bsky.socialSep 28, 2026, 8:20 AM

The 2026 PRIME symposium kicks off with reflections from Kelly McLellan on the importance of Patient and Public Involvement in ME/CFS research. #Prime26 #pwME #mecfs

@psmaldino.bsky.socialSep 27, 2026, 1:22 AMReposted by @cgatist.bsky.social

I just gave a talk on interdisciplinary yesterday that features a call for interdisciplinary people and not just diverse teams of disciplinary types. Today I read this essay with delight. Viva antedisciplinarity. journals.plos.org/ploscompbiol...

@georgemonbiot.bsky.socialSep 24, 2026, 6:29 AMReposted by @cgatist.bsky.social

Here's today's column on the astonishing, ongoing mistreatment of people with #ME/CFS. Please spread it far and wide: the only thing which can break the media's wall of indifference is seeing an article about the issue go viral. Thank you. 1/2
www.theguardian.com/commentisfre...

theguardian.comAbandoned, dismissed and gaslighted: there is no excuse for the way ME sufferers have been betrayed | George MonbiotChanges in guidance and science seem to have little impact on millions of devastated lives. It’s a social crisis playing out behind closed doors, says Guardian columnist George Monbiot
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@alemmatthees.bsky.socialSep 23, 2026, 8:46 AMReposted by @cgatist.bsky.social

For the love of the universe and the sake of millions of people with #MECFS and #LongCOVID can some funding body please fund the rest of #SequenceME / LC already?! WGS is one of the greatest crowning achievements of science and has enormous potential for pointing the compass in the right direction.

@binitakane.bsky.socialSep 23, 2026, 6:50 PMReposted by @cgatist.bsky.social

Every now and again it’s great for clinicians and researchers to meet and ‘chew the cud’. Fantastic to see Prof Chris Ponting and meet some of his incredible team in Edinburgh today.

Picture of Dr Binita Kane and Prof Chris Ponting smiling into the camera, with Arthur’s Seat (Edinburgh) in the background
@cgatist.bsky.socialSep 23, 2026, 7:06 PM

Nearly 2 years on, this has now been read 60,000+ times. Sad to say: it's as relevant today as it was then & as it was decades before.
Thank you @simonmcg.bsky.social for your help with this.

@cgatist.bsky.socialSep 22, 2026, 7:16 AM

Some of this we can resolve:
Human SNPs (on the array) are skewed towards being rare; few SNPs are correlated cos we didn’t use imputations; null/realistic simulations show TarGene’s good performance academic.oup.com/biostatistic...
We think we know why most hits are protective & will update
Thanks!

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