@florianingelfinger.bsky.social
Immunologist at the @ingelfingerlab.bsky.social Interested in innovative single cell technologies and computational biology. Formerly in Burkhard Becher, Ido Amit, Nir Yosef and Robert Zeiser labs.
@health-europe-de.bsky.socialReposted by @florianingelfinger.bsky.socialUm die komplexe Auswertung von Einzelzelldaten bei #Blutkrebs und #Lymphdrüsenkrebs zu erleichtern, haben Forschende um @florianingelfinger.bsky.social von der @uniklinik-fr.bsky.social und Kollegen des @weizmann.ac.il ein #KI Modell entwickelt, das wesentliche Teile dieser Analyse automatisiert.
@florianingelfinger.bsky.socialThanks a lot Lorenz! I would love to hear back about your experience! Also please reach out if you need any support! ☺️
@florianingelfinger.bsky.social3/3 Try CytoVI on your own data! Open source in scvi-tools, with tutorials covering batch correction, integration of different antibody panels, and downstream analysis.
docs.scvi-tools.org/en/stable/tu...
I'd love to hear what you discover!
@florianingelfinger.bsky.social2/3 We also apply CytoVI to routine clinical data to identify CLL cells and classify patient samples—a step toward reusing clinical cytometry archives for research and reference mapping.
Full walkthrough in our X tweetorial:
x.com/IdoAmitLab/s...
@florianingelfinger.bsky.social1/3 Deep generative modeling coming to cytometry! 🔬
CytoVI is now in Nature Methods: integrate flow cytometry, mass cytometry & CITE-seq, predict missing markers, and discover disease-associated cell states.