Integrating spatial + multimodal data with proteomics was our key motivation to develop AlphaPeptTools. So happy to work with @brennsteiner.bsky.social, our co-authors + an amazing #scverse community! Let us know your feature requests and thoughts on making your next analysis easier :)

Proteomics analysis has always lived in its own universe. AlphaPeptTools puts it in #scverse instead, so that proteome, transcriptome and spatial data live in one ecosystem. 11 search engines (DDA+DIA) read in, proteomics-specific statistics, #scverse native.
doi.org/10.64898/202...