@rom12relle.bsky.social @johnlees.bacpop.org & Chindelevitch present kamino, a reference- and alignment-free method that rapidly builds amino acid phylogenomic alignments directly from proteomes.
@molbioevol.bsky.social
@molbioevol.bsky.social@rom12relle.bsky.social @johnlees.bacpop.org & Chindelevitch present kamino, a reference- and alignment-free method that rapidly builds amino acid phylogenomic alignments directly from proteomes.
Two PhD positions open in my group @ethz.ch (Basel):
Digital twins of embryonic development.
🧬 Mathematical modelling of biology jobs.ethz.ch/job/view/JOP...
💻 Computing: parameter estimation (incl. PINNs), simulation environments jobs.ethz.ch/job/view/JOP...
@molinalab.bsky.socialWe have developed Ciclopes, a biology-informed deep-learning framework that uses an autoencoder to reconstruct periodic gene expression dynamics and estimates phase-dependent transcription and degradation rates #CompBio, #DeepLearning, #MechansticModelling, #scRNAseq.
@royalsocietypublishing.orgFrom individual thresholds to collective hysteresis: a mechanistic model of the dawn chorus: buff.ly/gtVWLSq #JRSocInterface #CompBio
@genox-veille.frPaired germline and tumor sequencing data from 1,110 colorectal or endometrial tumors across 1,073 patients were analysed to quantify how mismatch repair-deficient mutational signatures can be integrated into germline variant interpretation.
@artificialscience.bsky.social5 pharma firms trained an AI on 20,167 private protein structures, without sharing one. Accuracy: 35.6% → 52.1%. Analysis: #AIDrugDiscovery #AlphaFold #FederatedLearning #CompBio #OpenFold3 #AISB-1-Fed #MELLODDY
artificialscience.org/2026/09/fede...
@lji.orgOur 2026 LEAD Day scientific panel explores how AI, multi-omics, and increasingly data-rich approaches are changing the way we understand and treat #autoimmune and chronic disease.
#Immunology #Autoimmunity #Health #Medicine #DataScience #CompBio #AI
@drk-lo.bsky.socialI'm hiring a bioinformatician! Review of applications starts October 1 with a start date as soon as possible. 🧪 #Genomics #popGen #CompBio northeastern.wd1.myworkdayjobs.com/careers/job/...
@genox-veille.frInversions are balanced structural variants that escape most analyses because of the large repeats that flank them.
@morillalab.bsky.socialNew on the BCB CSIC channel: Ian Morilla (IHSM-CSIC-UMA) presents GeoTop, TaelCore, CoMM-BIP and S2-PepAnalyst — four tools worth a look for anyone into computational biology and bioinformatics. 🧬
@earlhaminst.bsky.socialJoining our #DataScience Group and working on the @BioFAIR Methods Commons we're seeking a #DevOps Engineer to build, run, and support a cohesive, world-class national service deployed on public cloud.
@genomebiolevol.bsky.social@fanny-pouyet.bsky.social et al. benchmarked three tree sequence reconstruction methods software by comparing the imbalance of reconstructed trees by these methods with that of the true simulated trees.
@molbioevol.bsky.socialS. Kumar, K. Tamura & S. Sharma present a phylogenomic subsampling-upsampling framework (PSU) that cuts runtime/memory by orders of magnitude while preserving accuracy in bootstrap support, model selection, and divergence time estimates.
@anhhle2702.bsky.social16/n: This is the culmination of 4 years of my postdoc funded by @wellcometrust.bsky.social and hosted by @mayorlab.bsky.social at @ucl.ac.uk. I also want to thank Jonas Hartmann and @ricardalert.bsky.social for their expertise in #compbio and modelling, which you can read in the paper! ❤️
@genox-veille.frMissense variant effect prediction remains a bottleneck in diagnostic genetics, and current predictors rely on clinical outcomes or population patterns rather than direct measures of functional impact, which creates data circularity.
@teresaberther.bsky.socialNot sure who decided I was grown-up enough to be first author on anything, much less a paper, and in @plos.org #CompBio - nevertheless, our paper and toolbox on circular permutation testing for #BrainBody interactions are out now!
🫶🏻 @eliobalestrieri.eurosky.social & @danlikesbrains.bsky.social
@earlhaminst.bsky.socialWe're recruiting for a DevOps Engineering with previous experience deploying and administering web applications or complex multi-user platforms in production environments. 🧬💻