Allele-Resolved Hybrid Embryos Reveal the Fates of Regulatory Divergence #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.11.750430v1

Towards a knowledge-enhanced single-cell foundation model #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2609.14970

RAGCell: Retrieval-Augmented Generation as Supervision for Versatile Single-cell Analysis #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2609.14147

Saddlepoint approximations for plug-in resampling #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2407.08911

CyclOT: Learning Quadratic Optimal Transport Maps via Synchronized Forward-Backward Interpolants #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2609.13892

A Stochastic Model of Intracellular Calcium Concentrations #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2609.13213

Multi-omics reveals a monocyte-macrophage-fibroblast axis in post-COVID-19 fibroinflammatory lung remodelling #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.11.750491v1

LucaCell: a sequence-centric foundation model for cross-species single-cell analysis #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.08.750024v1

Vesicle architecture licenses antigen-specific memory T cell immunity after mucosal immunization with infection-derived vesicles #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.09.750371v1

Single-Cell Profiling Reveals Innate Lymphoid Cells and OX40 Activation in Breast Cancer-Related Lymphedema #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.09.749825v1

An eicosanoid-enriched follicular microenvironment shapes germinal centre immune dynamics in antiretroviral-treated PLWH #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.09.750310v1

Dynamics of bleomycin-induced lung injury at single-nucleus resolution #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.08.750170v1

Single-cell splice isoform usage reveals distinct axes of cellular identity and senescence #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.11.748700v1

LIGER2: Scalable Single-Cell Integration with On-Disk Datasets #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.08.750130v1

A massively parallel synthetic gene atlas for learning compact cis-regulatory grammar across cellular contexts #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.13.751267v1

Single-cell proteomics reveals cell-type-specific functional coordination in PBMCs #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.11.751068v1

TAOK3 marks an invasion‑competent epithelial subset in cervical cancer, and its inhibition restrains tumor growth, sensitizes to paclitaxel, and remodels the immune microenvironment #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-10732337/latest

Conserved microglial programmes, non-transferable classifiers: boundaries of the single-cell TBI molecular clock #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.07.749982v1

Intravital microscopy and statistical image analysis of early engraftment of haematopoietic stem cells reveal dynamic and evolving cellular behaviours linked to progressive differentiation. #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.11.750961v1

New from Epigenome Technologies: the first fully validated Single-Cell CUT&Tag kit

Fully compatible with 10x Chromium® (ATAC), Fluent PiP-seq®, or BD Rhapsody

#Epigenetics #SingleCell #CUTandTag

Find out more at: u.epigenome.us/NYjSGQao