Reference-cell design shapes model evaluation in single-cell perturbation prediction #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-11119348/latest

Spatial profiling of NUT carcinoma reveals an immunosuppressive myeloid-dominant microenvironment #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-11131020/latest

Mitochondrial dynamics resolve physical-social tensions and challenges through adaptable multi-objective optimisation #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.22.753427v1

Mapping the human sperm proteome across compartments, donors and individual cells #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.22.753411v1

Lineage-informed factor analysis reveals heritable programs of single-cell gene expression #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.21.753290v1

Stromal innervation is prognostic in non-muscle-invasive bladder cancer and predicted by a distinct microenvironmental transcriptomic signature #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.21.751588v1

Speciesformer learns conserved cellular states for cross-species generative virtual cell modeling #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.22.752128v1

An NR2F1-dependent retinoic acid network controls retinal specialization in mice and reveals foveal hypoplasia in patients with BBSOAS #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.22.753406v1

🐟 Zebrahub: a zebrafish single-cell UMAP with RNA-velocity streamlines, cells as points and flow as lines in one scene. #SingleCell

Demo: demos.luxarviewer.dev/d/zebrahub_...

Luxar is made for 3D UMAPs. 500K Tabula Sapiens cells from 24 tissues as points coloured by organ, with a legend in the scene; hovering a cell names its cell type and tissue. Millions of points stay interactive. #SingleCell

Demo: demos.luxarviewer.dev/d/tabula_sa...

A Bayesian framework reveals heterogeneous and stochastic decision-making in NK cell cytotoxicity #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.16.752048v1

Space partitioning by self-organized epithelial networks #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.16.750084v1

Cell-type specific transcriptional risk scores and longitudinal multiple sclerosis outcomes #SingleCell 🧪🧬🖥️
https://www.medrxiv.org/content/10.64898/2026.09.21.26363545v1

CREBRF rs373863828 minimally regulates gene expression in subcutaneous adipose tissue of Samoan adults #SingleCell 🧪🧬🖥️
https://www.medrxiv.org/content/10.64898/2026.09.21.26363571v1

Multi-omics analyses reveal hypoxia-induced CHD2 as a key driver of malignant progression and microenvironment remodeling in HCC via the TGF-β/SMAD axis #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-11113324/latest

Flow Matching for Count Data #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2605.07746

Finite Topological Space Filtrations: A Topological Framework for Data Analysis #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2512.23348

Orthogonal JEPA: Factorized Predictive States for Latent World Models #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2608.20065

Simulation-free Structure Learning for Stochastic Population Dynamics #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2510.16656

Fully Discrete Multi-Entropy Stability of High-Order Schemes for Compressible MHD: A Weak-to-Strong Framework #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2609.26791