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@prepub-singlecell.bsky.socialSep 30, 2026, 7:00 AM

Integrated transcriptomic analysis identifies Paternally Expressed Gene 10 as a novel candidate biomarker associated with aggressive features in liposarcoma #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.24.754104v1

@prepub-singlecell.bsky.socialSep 30, 2026, 4:00 AM

Towards Scalable Context-Aware Single-Cell Spatial Transcriptomics Prediction from Histology Images #SingleCell 🧪🧬🖥️
https://arxiv.org/abs/2609.36429

@gpbees.bsky.socialSep 30, 2026, 3:25 AM

A valuable step toward connecting atlas-scale single-cell data with ocular biology and precision ophthalmology.

#SingleCell #scRNAseq #Ophthalmology #Transcriptomics #CellAtlas

@prepub-singlecell.bsky.socialSep 30, 2026, 1:01 AM

Cerebral microthrombi promote focal Cav-1-dependent blood-brain barrier impairment, triggering neuroinflammation and neuronal damage after traumatic brain injury #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.24.754043v1

@prepub-singlecell.bsky.socialSep 30, 2026, 1:00 AM

MOD-scTWAS: Leveraging gene co-expression for single-cell transcriptome-wide association studies #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.24.754034v1

@prepub-singlecell.bsky.socialSep 30, 2026, 1:00 AM

ScProteoAgent enables natural-language-driven single-cell proteomics analysis and interpretation #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.24.754011v1

@prepub-singlecell.bsky.socialSep 29, 2026, 10:00 PM

Utilizing single-cell data for per-cell type eQTL mapping in the human pancreas #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.23.753551v1

@prepub-singlecell.bsky.socialSep 29, 2026, 10:00 PM

DECIPHER integrates disentangled representation learning and prototype-based cell-type deconvolution across molecular modalities #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.24.753940v1

@epigenometech.bsky.socialSep 29, 2026, 7:47 PM

Download our poster to learn how we applied Droplet Paired-Tag to Alzheimer's disease post-mortem brain tissue to reveal specific cellular changes and potential therapeutic targets

#Epigenetics #SingleCell #DropletPairedTag #PairedTag #Multiomics #Alzheimers

u.epigenome.us/I8R4vBn2

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@prepub-singlecell.bsky.socialSep 29, 2026, 7:01 PM

Inferring cascade drivers of VEXAS syndrome by a causal machine learning tool CauNagi #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.23.753348v1

@prepub-singlecell.bsky.socialSep 29, 2026, 7:00 PM

EpiZoo: a DNA sequence-aware foundation model for cross-species single-cell epigenomics #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.24.754017v1

@prepub-singlecell.bsky.socialSep 29, 2026, 7:00 PM

Genetic Variation, Iron Status, and FGF23 Signaling Converge to Regulate Renal Calcium Buffering in Sickle Cell Disease #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.23.752598v1

@prepub-singlecell.bsky.socialSep 29, 2026, 7:00 PM

HIV-1 prime-boost vaccination shapes distinct clonal trajectories and memory precursor states of Env- and Gag-specific T cells #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.23.752815v1

@prepub-singlecell.bsky.socialSep 29, 2026, 7:00 PM

Apical adhesion of meningococci controls host cell basal traction force through Ancreopodia formation #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.29.754870v1

@prepub-singlecell.bsky.socialSep 29, 2026, 7:00 PM

Functional Deorphanization of Tumor-reactive TCRs Uncovers a Landscape of Shared, Immune Dominant Antigens across Cancers #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.09.28.755065v1

@prepub-singlecell.bsky.socialSep 29, 2026, 4:02 PM

Identification and experimental validation of biomarkers associated with lipotoxicity in chronic obstructive pulmonary disease through transcriptomic and single-cell RNA sequencing analysis #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-10307386/latest

@prepub-singlecell.bsky.socialSep 29, 2026, 4:02 PM

Cross-species comparison delineates transferability limits of myeloid transcriptional measurements in human osteosarcoma #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-10860793/latest

@prepub-singlecell.bsky.socialSep 29, 2026, 4:02 PM

Controlled Ultraviolet B exposure attenuates form-deprivation myopia by restoring an Egr1-centred retinal transcriptional network #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-10885580/latest

@prepub-singlecell.bsky.socialSep 29, 2026, 4:02 PM

Transcription Factor MEF2B Promotes Cisplatin Resistance in Neuroblastoma by Upregulating CRABP1 #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-10794128/latest

@prepub-singlecell.bsky.socialSep 29, 2026, 4:01 PM

Integrative genomic analyses reveal regional and cellular convergence between uterine fibroids and endometriosis #SingleCell 🧪🧬🖥️
https://www.researchsquare.com/article/rs-11036637/latest