🚨 Updated pre-print on @biorxiv-devbio.bsky.social
#PancreasDevelopment #SpatialTranscriptomics #multilineage-organoids
@labspagnoli.bsky.social
@labspagnoli.bsky.social🚨 Updated pre-print on @biorxiv-devbio.bsky.social
#PancreasDevelopment #SpatialTranscriptomics #multilineage-organoids
@ajcrussell.bsky.social🔬 Postdoc: Spatial Lineage Tracing and Single-Cell Multiomics
Closes 25th Oct
fa-evzn-saasfaukgovprod1.fa.ocs.oraclecloud.com/hcmUI/Candid...
#PostdocJobs #SpatialTranscriptomics #SingleCell #LineageTracing
@epigenomist.bsky.social🧬 SCAPeSCLC v1.4.0 | New Update
Added 126 #EpiFactors associated genes with ROI- and patient-level expression data, functional annotations, and gene-mapping quality control.
zenodo.org/records/2328...
#SCAPeSCLC #Epigenetics #SpatialTranscriptomics
@earlhaminst.bsky.socialA new preprint introduces two standardized, end-to-end pipelines for single-cell RNA-seq and imaging-based #spatialtranscriptomics analysis.
EISCA supports droplet- and plate-based scRNA-seq, while EISTA is tailored for high-resolution spatial platforms.
@mspcf.bsky.social(2/2) Proud to present our new #SpatialOmics platform w/ Aina Bonet & highlight our advances in MS-based #SpatialProteomics (Poster 1 - Session 2). Looking forward to future collaborations!
#MALDIImaging
#DeepVisualProteomics
#SpatialTranscriptomics
#IRBBarcelonaResearchTechnologies
#ESSB
@fiosgenomics.bsky.socialDoes your study require #spatialtranscriptomics?
We have a sample report available demonstrating how #bioinformatics can help!
Request the report today at:
https://www.fiosgenomics.com/spatial-transcriptomic-analysis-report
@nonchev.bsky.social@nonchev.bsky.social🔗 Read the perspective: auroraomics.org/news/the-une... #SpatialTranscriptomics #SpatialBiology #DigitalPathology #ComputationalPathology
@mapjournals.bsky.social#Targetome
Spatial-seq 2.0 maps how Panax notoginseng versus ginseng saponins differently protect brain regions after acute ischemic stroke.
Details: https://www.maxapress.com/article/doi/10.48130/targetome-0026-0038
#Panax #Stroke #SpatialTranscriptomics #Neuroprotection
@drmagalhaes.bsky.socialUsing spatial transcriptomics, we characterized the molecular and microenvironmental changes associated with the progression of oral epithelial dysplasia (OED) to oral squamous cell carcinoma (OSCC).
#SpatialTranscriptomics #Cancer #OralPathology #CancerResearch aacrjournals.org/mcr/article-...
@earlhaminst.bsky.social📃 In a new preprint, scientists introduce two standardized, end-to-end pipelines for single-cell RNA-seq and imaging-based #spatialtranscriptomics analysis.
EISCA supports droplet- and plate-based scRNA-seq, while EISTA is tailored for high-resolution spatial platforms.
@scilifelab.seFor his “ground-breaking contributions to #MolecularBiotechnology and #genomics, in particular the development of #SpatialTranscriptomics”, Joakim Lundeberg (SciLifeLab/KTH) is awarded the @scienceacademyswe.bsky.social Gold Medal 2026! 🧪
@imm.ox.ac.uk🧪 Can AI turn routine pathology images into molecular information?
A new review from Kexin Xu, Hashem Koohy and Agne Antanaviciute explores advances in predicting spatial gene expression directly from tissue images.
#SpatialTranscriptomics #DigitalPathology #MRCWIMM #AcademicSky
@exo-beyondthecell.bsky.socialNew review in EXO - Beyond the Cell!
Title: Predicting spatial transcriptomics from histology images: Progress, challenges, and directions
Explore AI-powered virtual molecular profiling from H&E slides:
sciexplor.com/exo/articles...
#SpatialTranscriptomics #DigitalPathology #AI
@lingting-shi.bsky.socialShoutout to co-first authors Ajna Uzuni and Ximi Wang, and to Michael Pressler
@michaelppressler.bsky.social
. Thanks also to the McFaline-Figueroa Lab
@jlmcfalinefigueroa.bsky.social
for their support. Check out our paper!
#GVHD #SingleCell #TCR #SpatialTranscriptomics #Immunology
@cancers-mdpi.bsky.social🧬Spatial #Transcriptomics in #LungCancer and Pulmonary Diseases: A Comprehensive Review
🧑🔬by Da Hyun Kang, Yoonjoo Kim et al. from Chungnam National University
📊Cited 19 times!
Read it here🔗 www.mdpi.com/2072-6694/17...
#SpatialTranscriptomics #PulmonaryDisease #TumorMicroenvironment
@gpbees.bsky.social🧵 How can we reconstruct cellular spatial organization when spatial transcriptomics lacks single-cell resolution?
A new #GPB study introduces SPCC, a deep-learning framework integrating #scRNAseq and #SpatialTranscriptomics to infer spatial cell–cell interactions. 1/6
@onesinglecell.bsky.socialOur paper is out in Nature Methods! 🧑💻 There are 50+ methods for spatially-aware clustering on spatial transcriptomics data. How should we use them? A thread 🧵 (1/7)
📄 doi.org/10.1038/s415...
#spatialtranscriptomics #bioinformatics #computationalbiology
@earlhaminst.bsky.social📣 Save the date! The Norwich Single-Cell and Spatial Symposium returns in 2027.
Join a supportive forum for researchers working on similar challenges across diverse systems to discuss, network, and share knowledge.
🗓️ 22-23 June 2027
@scilifelab.seAdvanced #3Dimaging and #SpatialTranscriptomics are brought together to better understand #PulmonaryHypertension – a life-threatening condition for which current treatments can slow disease progression and relieve symptoms, but not target the underlying cause. ↓ 🧪